Microscopy with Deep Learning – Enhancing super-resolution microscopy with deep learning

– Call for projects 2019 : Paris Region PhD² –
  • Image Analysis
  • Single Cell / Single Molecule
Christophe Zimmer

AMCervUS – Machine learning for ultrafast vascular and functional ultrasound imaging of the brain

– Call for projects 2019 : Paris Region PhD² –
  • Image Analysis
  • Technologies for in vivo biology on animal models
Mickaël Tanter

CartoBrain – High-resolution mapping of neural networks by optical microscopy in preclinical research

– Call for projects 2019 : Paris Region PhD² –
  • Image Analysis
  • Single Cell / Single Molecule
Thierry Delzescaux

MECAFM – In situ AFM for probing tissue and cell mechanics in controlled microenvironment

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Microfluidics
  • Organs-on-chips
  • Single Cell / Single Molecule
Benoit Ladoux , Rene-Marc Mege, Delphine Delacour, Nicolas Minc

O P I – Oblique-Plane Imaging for optical sectioning and fast volumetric imaging : studying the cell nucleus in whole with molecular resolution

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Biophotonics and waves
  • Single Cell / Single Molecule
  • Technologies for in vivo biology on animal models
Ignacio Izzedin, Antoine Coulon

3BIOT – 3D Biological Optical Tweezers

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Biophotonics and waves
  • Single Cell / Single Molecule
Sinan Haliyo, Thierry Rose, Jean-Baptiste Manneville

SYNALGIA – Coupling of microfluidic lab-on-chip to ion-mobility mass spectrometry for Parkinson disease biomarker validation

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Microfluidics
  • High Tech / Low Cost Technologies
  • Technologies for in vivo biology on animal models
Frédéric Halgand, Antoine Pallandre

CystEar – Development of a scalable method to generate stem cell-derived inner ear organoids

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Microfluidics
  • Organs-on-chips
Samy Gobaa, Raphael Etournay

ULTRASTIM – Large scale stimulation and imaging of neuronal ensembles at single cell resolution using acousto-optic methods

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Stéphane Dieudonné, Brice Bathellier

3‐DiPSI – Wavefront imaging for 3D stabilization and super-resolution

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Biophotonics and waves
  • High Tech / Low Cost Technologies
Pascal Berto, Audrey Salles, Elric Esposito, Cécile Leduc, Hilde de Reuse, Nathalie Sauvonnet, Chiara Zurzolo

StemCellTrack – Microfluidic platform for neurosphere culture and quantitative analysis

– Equipment support for the development of innovative technologies to support research in Life Sciences –
  • Microfluidics
  • Organs-on-chips
Charles Baroud, Sébastien Sart , Laure Bally-Cuif

MetaboNIMS – Optimisation of MALDI-ToF MS for coral metabolites analysis

– Call for projects 2019 : Co-development of innovative technologies & methods –
  • Microfluidics
  • Organs-on-chips
Alain Paris, Yong Chen

Development of new gut on chip replicating the gut structure and dynamics

– Call for projects 2019 : Co-development of innovative technologies & methods –
  • Microfluidics
  • Organs-on-chips
Stéphanie Descroix, Danijela Vignjevic

Fast2P – A fast and a large-field two-photon light- sheet platform for functional and anatomical imaging

– Dissemination of new technologies or methods for new applications in Life Sciences (noncommercial methods and/or instruments) –
  • Biophotonics and waves
  • Image Analysis
  • Technologies for in vivo biology on animal models
Volker Bormuth, Georges Debrégeas, Raphaël Candelier, Nicolas Renier, Pascal Legendre, Jean-Marie Mangin, Nicolas Michalski , Alain Chedotal

ModLoc – Modulated localization microscopy

– Call for projects 2019 : Co-development of innovative technologies & methods –
  • Biophotonics and waves
  • Single Cell / Single Molecule
Emmanuel Fort, Christian Poüs

SPHINX – The SPHeroid Image aNalysis toolboX

– Dissemination of new technologies or methods for new applications in Life Sciences (noncommercial methods and/or instruments) –
  • Microfluidics
  • Organs-on-chips
Jean-Christophe Olivo-Marin, Charles Baroud, Elaine Del Nery, Philippe Bousso

ENCOMPASS – Evaluation of Neuronal COunting Methods in PreclinicAl StudieS

– Call for projects 2019 : Co-development of innovative technologies & methods –
  • Image Analysis
  • Technologies for in vivo biology on animal models
Thierry Delzescaux, Delphine Desjardins, Claire Paquet

IMAChip – A microscop with a disruptive imaging and sensing architecture

– Dissemination of new technologies or methods for new applications in Life Sciences (noncommercial methods and/or instruments) –
  • Biophotonics and waves
  • High Tech / Low Cost Technologies
Hamed Merdji, Pablo Radicella, Anna Campalans, Laure Bally-Cuif, Nicolas Dray, Franck Chauvat, François Treussart, Christelle Langevin

STED – A STimulated Emission Depletion microscope for 4D live nanoscopy

– Dissemination of new technologies or methods for new applications in Life Sciences (noncommercial methods and/or instruments) –
  • Biophotonics and waves
  • Single Cell / Single Molecule
  • Technologies for in vivo biology on animal models
Gael Moneron, Jost Enninga, Philippe Bastin, David Digregorio, Laurence Cathala, Nathalie Aulner

KaryoDrop – Noninvasive prenatal diagnosis of trisomy 21 based on circulating trophoblastic cells

– Call for projects 2019 : Co-development of innovative technologies & methods –
  • Microfluidics
  • Single Cell / Single Molecule
Jean Baudry, Patrizia Paterlini Bréchot

Memorable – Decoding human brain neuroplasticity in brain-on-a-chip format

– Call for projects 2018 : Equipment support –
  • Microfluidics
  • Organs-on-chips
Ayako Yamada, Jean-Michel Peyrin

HoloCal – High speed volumetric imaging and photostimulation

– Call for projects 2018 : Equipment support –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Nicolas Renier, Nelson Rebola, Alberto Bacci, Valentina Emiliani, Brice Bathellier, Jérémie Barral, Nicolas Michalski

Re-RAMP-3 – Ultrafast 3-photon non-linear microscopy

– Call for projects 2018 : Equipment support –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Laurent Bourdieu, Stéphane Dieudonné, Clément Léna, Daniela Popa, Sonia Garel

EVortex – Triggering massive Extracellular Vesicle production by a turbulent flow in bioreactors to expedite regenerative medicine applications

– Call for projects 2018 : Equipment support –
  • Microfluidics
  • High Tech / Low Cost Technologies
Amanda K. A. Silva, Gabriel Rahmi

AVIRON – Amortized Inference and Virtual Reality to segment large volumes of neuron data

– Call for projects 2018 : Innovative technologies –
  • Image Analysis
  • High Tech / Low Cost Technologies
  • Technologies for in vivo biology on animal models
Jean-Baptiste Masson, Pierre-Marie Lledo, Maxime Dahan †

AutoStemLab – Automated differentiation of human induced pluripotent stem cells and Lab on-a-Chip models for cardiac tissue engineering

– Call for projects 2018 : Innovative technologies –
  • Microfluidics
  • High Tech / Low Cost Technologies
  • Organs-on-chips
Yong Chen, Onnik Agbulut

INFLUERE IN VISCERA – Coupling of interferometric microscopy and a fluorescence microscope channel

– Call for projects 2018 : Innovative technologies –
  • Biophotonics and waves
  • High Tech / Low Cost Technologies
  • Technologies for in vivo biology on animal models
Claude Boccara, Marianne De Paepe, Harry Sokol

Integrated single-cell level system for investigating mutations and evolution

– Call for projects 2018 : Innovative technologies –
  • Image Analysis
  • Microfluidics
  • Single Cell / Single Molecule
  • Technologies for in vivo biology on animal models
Lydia Robert, Marina Elez

Development of a reproducible multiscale correlative microscopy workflow to track fates and functions of individual exosomes in vivo

– Call for projects 2018 : Innovative technologies –
  • Image Analysis
  • Single Cell / Single Molecule
  • Technologies for in vivo biology on animal models
Guillaume van Niel , Graça Raposo, Jean Salamero

Novel microfluidics-based technology for multiparametric single cell analysis of the heterogeneity in the myeloid compartment of particular cancers

– Call for projects 2018 : Innovative technologies –
  • Microfluidics
  • High Tech / Low Cost Technologies
  • Single Cell / Single Molecule
Sebastian Amigorena, Emanuela Romano, Andrew Griffiths

Dynamic, volumetric super-resolution imaging of cellular organization and molecular orientation with reversible cryo-arrest technology

– Call for projects 2018 : Innovative technologies –
  • Biophotonics and waves
  • Single Cell / Single Molecule
Bassam Hajj, Guillaume Orsi

Open platform for 3D cell culture in microfluidics

– Call for projects 2018 : Innovative technologies –
  • Microfluidics
  • Organs-on-chips
Charles Baroud, Christophe d'Enfert, Nathalie Sauvonnet, Philippe Sansonetti, Philiipe Bousso, Eleine Del Nery, Rachel Golub, Ana Cumano

A microfluidic platform for automated whole-organism phenotyping of C. elegans post-embryonic development at cellular resolution

– Call for projects 2018 : Innovative technologies –
  • Image Analysis
  • Microfluidics
  • Technologies for in vivo biology on animal models
Wolfgang Keil, Julie Plastino

MiB2Bplatelet (Microfluidics B2B platelet production) – Scaling-up microfluidics-based processes: bringing platelet production from bench to bedside

– Call for projects 2018 : Innovative technologies –
  • Microfluidics
  • High Tech / Low Cost Technologies
  • Technologies for in vivo biology on animal models
Mathilde Reyssat, Isabelle Dusanter

A quantitative lattice light-sheet microscope: imaging molecules and intensities in embryos at high spatiotemporal resolution

– Call for projects 2018 : Innovative technologies –
  • Biophotonics and waves
  • Single Cell / Single Molecule
  • Technologies for in vivo biology on animal models
Thomas Gregor, François Spitz

A technology platform to study the role of DNA-damage in T-lymphocytes exhaustion

– Call for projects 2018 : Innovative technologies –
  • Image Analysis
  • Single Cell / Single Molecule
  • Technologies for in vivo biology on animal models
Felice Alessio Bava , Sebastian Amigorena

Development of a High-Sensitivity High-Power Pulse Electron Paramagnetic Resonance Spectrometer for In-Cell Structural Biology

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Sun Un, Christian Specht, Shixin Ye

Development of novel optical tools to investigate ensemble dynamics of large-scale neural populations within freely behaving rodents

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Cathie Ventalon, Michaël Zugaro

Plantuidics – A microfabrication unit for the versatile design of microfluidic platforms for plant cell and developmental biology

– Call for projects 2017 : Equipment support –
  • Microfluidics
  • Organs-on-chips
  • Technologies for in vivo biology on animal models
Sébastien Thomine, Avin Babataheri, David Bouchez, Béatrice Satiat-Jeunemaitre, Samantha Vernhettes, Jean Colcombet, Jean-Christophe Palauqui

Preclinical multimodal ultrasound imaging for investigation of brain connectivity development

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Mickael Tanter, Thomas Bourgeron

LN2 – Light Nanoscopy : Second Generation – New approaches for super-resolution microscopy

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • High Tech / Low Cost Technologies
  • Single Cell / Single Molecule
Bruno Robert, Olivier Espeli

Fast prototyping at micron resolution

– Call for projects 2017 : Equipment support –
  • Microfluidics
  • Organs-on-chips
  • Single Cell / Single Molecule
Guillaume Laffite, Jean-Louis Viovy, Jacques Fattaccioli, Pascal Silberzan, Philippe Nghe, Matthieu Piel, Maxime Dahan †

MAGDIAG – Détection d’objets biologiques uniques par des nanoparticules magnétiques

– Call for projects 2017 : Innovative technologies –
  • Microfluidics
  • High Tech / Low Cost Technologies
Guenaëlle Jasmin Lebras, Stéphanie Simon

Novel organ-on-chip microfluidic device based on hydraulically actuated hydrogel layers

– Call for projects 2017 : Innovative technologies –
  • Microfluidics
  • Organs-on-chips
Samy Gobaa, Nathalie Sauvonnet

DropPath – Droplet-based single-cell sequencing system for pathogens investigation

– Call for projects 2017 : Equipment support –
  • Microfluidics
  • Single Cell / Single Molecule
Andrew Griffiths, Didier Mazel, Jost Enninga, Philippe Bastin, Nadia Naffakh, Philippe Sansonetti, Nathalie Sauvonnet, Lisa Chakrabarti

STEMCut – Adaptive optics for in vivo photo-ablation and multiphoton imaging

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • Technologies for in vivo biology on animal models
Emmanuel Beaurepaire, Laure Bally-Cuif

MACS – Acoustic Manipulation of Stem Cells

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • Microfluidics
  • Organs-on-chips
Jérôme Larghero, Jean-Luc Aider

3D-MORPHOSTAT – Unraveling molecular architecture at the nm level with multicolor 3D super‐resolution microscopy and object‐based spatial analysis

– Call for projects 2017 : Innovative technologies –
  • Biophotonics and waves
  • Image Analysis
  • Single Cell / Single Molecule
Jean-Christophe Olivo-Marin, Lydia Danglot